YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	XTH18_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSCGTSFA FLIMFLFAAQ SMHVYAGSFH KDVQIHWGDG RGKVRDRDGK LLSLSLDKSS  60
   61 GSGFQSNQEF LYGKAEVQMK LVPGNSAGTV TTFYLKSPGT TWDEIDFEFL GNLSGHPYTL 120
  121 HTNVYTKGSG DKEQQFHLWF DPTVNFHTYC ITWNPQRIIF TVDGIPIREF KNSESIGVPF 180
  181 PTKQPMRLYA SLWEAEHWAT RGGLEKTDWS KAPFTAFYRN YNVEGCVWAN GKSSCPANSS 240
  241 WFTQQLDSNG QTRMKGVQSK YMVYNYCNDK RRFPRGVPVE CS

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	282	0.99