YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	XTH12_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFATKQSP LLLASLLILI GVATGSFYDS FDITWGAGRA NIFESGQLLT CTLDKTSGSG  60
   61 FQSKKEYLFG KIDMKIKLVP GNSAGTVTAY YLSSKGETWD EIDFEFLGNV TGQPYVIHTN 120
  121 VFTGGKGNRE MQFYLWFDPT ADFHTYTVLW NPLNIIFLVD GIPIRVFKNN EANGVAYPKS 180
  181 QPMKIYSSLW EADDWATQGG KVKTDWTNAP FSASYRSFND VDCCSRTSIW NWVTCNANSN 240
  241 SWMWTTLNSN QLGQLKWVQK DYMIYNYCTD FKRFPQGLPT ECNLN

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	285	0.99