YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	XT11_ARATH, XTH1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMVVVAVVA AAQGQEETTG FVTWGNNYYQ TWGHQALVIN KTSELQLTLD KNSGSGFESQ  60
   61 LIYGSGYFNV RIKAPQTTST GVITSFYLIS RSSRHDELCF QILGKNGPPY LLNTNMYLYG 120
  121 EGGKDQRFRL WFDPTKDYHS YSFLWNPNQL VFYVDDTPIR VYSKNPDVYY PSVQTMFLMG 180
  181 SVQNGSIIDP KQMPYIAKFQ ASKIEGCKTE FMGIDKCTDP KFWWNRKQLS SKEKTLYLNA 240
  241 RKTYLDYDYC SDRQRYPKVP QECGSYT

Type	Start	End	Confidence
Signal Peptide	1	14	0.86
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	267	0.99