YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VSP2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILSLSLLL LLAATVSASV PGLIELVDSK TIFGNVAELL EKEKLSINYA NCRSWHLGVE  60
   61 TSNIIDFDTV PANCKDYVED YLITSKQYQY DSKTVCKEAY FYAKGLALKN DTVNVWIFDL 120
  121 DDTLLSSIPY YAKYGYGTEK TDPGAYWLWL GTGASTPGLP EALHLYQNII ELGIEPIILS 180
  181 DRWKLWKNVT LDNLEAAGVT YWKHLILKPN GSNLRQVVYK SKVRKSLVKK GYNIVGNIGD 240
  241 QWADLVEDTP GRVFKLPNPL YYVPS

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	265	0.99