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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VPEB_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSCYFRPA LLLLLVLLVH AESRGRFEPK ILMPTEEANP ADQDEDGVGT RWAVLVAGSS  60
   61 GYGNYRHQAD VCHAYQILRK GGLKEENIVV LMYDDIANHP LNPRPGTLIN HPDGDDVYAG 120
  121 VPKDYTGSSV TAANFYAVLL GDQKAVKGGS GKVIASKPND HIFVYYADHG GPGVLGMPNT 180
  181 PHIYAADFIE TLKKKHASGT YKEMVIYVEA CESGSIFEGI MPKDLNIYVT TASNAQESSY 240
  241 GTYCPGMNPS PPSEYITCLG DLYSVAWMED SETHNLKKET IKQQYHTVKM RTSNYNTYSG 300
  301 GSHVMEYGNN SIKSEKLYLY QGFDPATVNL PLNELPVKSK IGVVNQRDAD LLFLWHMYRT 360
  361 SEDGSRKKDD TLKELTETTR HRKHLDASVE LIATILFGPT MNVLNLVREP GLPLVDDWEC 420
  421 LKSMVRVFEE HCGSLTQYGM KHMRAFANVC NNGVSKELME EASTAACGGY SEARYTVHPS 480
  481 ILGYSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle