YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VPEA_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTVVSFLAL FLFLVAAVSG DVIKLPSLAS KFFRPTENDD DSTKWAVLVA GSSGYWNYRH  60
   61 QADVCHAYQL LKKGGVKEEN IVVFMYDDIA KNEENPRPGV IINSPNGEDV YNGVPKDYTG 120
  121 DEVNVDNLLA VILGNKTALK GGSGKVVDSG PNDHIFIYYS DHGGPGVLGM PTSPNLYAND 180
  181 LNDVLKKKYA SGTYKSLVFY LEACESGSIF EGLLPEGLNI YATTASNAEE SSWGTYCPGE 240
  241 DPSPPSEYET CLGDLYSVAW IEDSEKHNLQ TETLHEQYEL VKKRTAGSGK SYGSHVMEFG 300
  301 DIGLSKEKLV LFMGTNPADE NFTFVNENSI RPPSRVTNQR DADLVHFWHK YQKAPEGSAR 360
  361 KVEAQKQVLE AMSHRLHVDN SILLIGILLF GLEGHAVLNK VRPSGEPLVD DWDCLKSLVR 420
  421 AFERHCGSLS QYGIKHMRSI ANMCNAGIQM RQMEEAAMQA CPTIPTSPWS SLDRGFSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle