YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRR57_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METTKKLSVL LCLFFTMNQA ISESDSDEHM ATFCNDSSGN FTRNTTYNTN LNTLLSTLSN  60
   61 QSSFANYYNL TTGLGSDTVH GMFLCIGDVN RTTCNACVKN ATIEIAKNCT NHREAIIYYF 120
  121 SCMVRYSDKF FLSTLETKPN TYWSSDDPIP KSYDKFGQRL SDKMGEVIIR SSLLSSSFTP 180
  181 YYLMDTTTFD NLYDLESVVQ CSPHLDPKNC TTCLKLALQE LTQCCGDQLW AFIFTPKCLV 240
  241 SFDTSNSSSL PPLPPPSRSG SFSIRGNNKI LVGMILAVSV FAFLGL

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	286	0.95