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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TRPB1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASGTSATF RASVSSAPSS SSQLTHLKSP FKAVKYTPLP SSRSKSSSFS VSCTIAKDPP  60
   61 VLMAAGSDPA LWQRPDSFGR FGKFGGKYVP ETLMHALSEL ESAFYALATD DDFQRELAGI 120
  121 LKDYVGRESP LYFAERLTEH YRRENGEGPL IYLKREDLNH TGAHKINNAV AQALLAKRLG 180
  181 KKRIIAETGA GQHGVATATV CARFGLECII YMGAQDMERQ ALNVFRMRLL GAEVRGVHSG 240
  241 TATLKDATSE AIRDWVTNVE TTHYILGSVA GPHPYPMMVR DFHAVIGKET RKQALEKWGG 300
  301 KPDVLVACVG GGSNAMGLFH EFVNDTEVRM IGVEAAGFGL DSGKHAATLT KGDVGVLHGA 360
  361 MSYLLQDDDG QIIEPHSISA GLDYPGVGPE HSFFKDMGRA EYYSITDEEA LEAFKRVSRL 420
  421 EGIIPALETS HALAYLEKLC PTLSDGTRVV LNFSGRGDKD VQTVAKYLDV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle