YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TRXB2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCWISMSQSR FIIKSLFSTA GGFLLGSALS NPPSLATAFS SSSSSSSAAA AVDMETHKTK  60
   61 VCIVGSGPAA HTAAIYASRA ELKPLLFEGW MANDIAPGGQ LTTTTDVENF PGFPEGILGI 120
  121 DIVEKFRKQS ERFGTTIFTE TVNKVDFSSK PFKLFTDSRT VLADSVIIST GAVAKRLSFT 180
  181 GSGEGNGGFW NRGISACAVC DGAAPIFRNK PLVVIGGGDS AMEEANFLTK YGSKVYIIHR 240
  241 RDTFRASKIM QQRALSNPKI EVIWNSAVVE AYGDENGRVL GGLKVKNVVT GDVSDLKVSG 300
  301 LFFAIGHEPA TKFLDGQLEL DEDGYVVTKP GTTKTSVVGV FAAGDVQDKK YRQAITAAGT 360
  361 GCMAALDAEH YLQEIGSQEG KSD

Type	Start	End	Confidence
Signal Peptide	1	36	0.94
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	383	0.99