YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TLPH_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASINLFLFA FLLLLSHASA STVIFYNKCK HPVWPGIQPS AGQNLLAGGG FKLPANKAHS  60
   61 LQLPPLWSGR FWGRHGCTFD RSGRGHCATG DCGGSLSCNG AGGEPPATLA EITLGPELDF 120
  121 YDVSLVDGYN LAMSIMPVKG SGQCSYAGCV SDLNQMCPVG LQVRSRNGKR VVACKSACSA 180
  181 FNSPQYCCTG LFGNPQSCKP TAYSKIFKVA CPKAYSYAYD DPTSIATCSK ANYIVTFCPH 240
  241 HRH

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	243	0.99