YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TL1Y_ARATH
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVASLQLI LPPRPRSTKL LCSLQSPKQE QELSSTSPPI SLLPKLISFA LAISLTSFSP  60
   61 ALAIPSLSSS QPLTTPFTQS KFVQTGLLNG KIRPCPSTNP GCVSTNPTSS SFSFPLTIPE 120
  121 TDTQDPIEKL KEAIMSTQKN PKFVVLEDTP YGRYVEAEVE GGGFSRDVME FLVKQDVVAY 180
  181 RCMATKVTFV YPFTTAFGDS KGQEERLKKL IDQLGWYAPT FESME

Type	Start	End	Confidence
Cytoplasmic	1	45	0.59
Transmembrane Helix	46	64	0.60
Non-Cytoplasmic	65	225	0.98