YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TL17_ARATH
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLPVQFTR NQISSPFFSV NLRREPRSLV TVHCSAGENR ENGEGVKKSL FPLKELGSIA  60
   61 CAALCACTLT IASPVIAANQ RLPPLSTEPD RCEKAFVGNT IGQANGVYDK PLDLRFCDYT 120
  121 NDQTNLKGKT LSAALMVGAK FDGADMTEVV MSKAYAVEAS FKGVNFTNAV IDRVNFGKSN 180
  181 LKGAVFRNTV LSGSTFEEAN LEDVVFEDTI IGYIDLQKIC RNESINEEGR LVLGCR

Type	Start	End	Confidence
Cytoplasmic	1	55	0.84
Transmembrane Helix	56	78	0.80
Non-Cytoplasmic	79	236	0.99