YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SYP52_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSDPWMR EYNEALKLSE DINGMMSERN ASGLTGPDAQ RRASAIRRKI TILGTRLDSL  60
   61 QSLLVKVPGK QHVSEKEMNR RKDMVGNLRS KTNQVASALN MSNFANRDSL FGTDLKPDDA 120
  121 INRVSGMDNQ GIVVFQRQVM REQDEGLEKL EETVMSTKHI ALAVNEELTL QTRLIDDLDY 180
  181 DVDITDSRLR RVQKSLALMN KSMKSGCSCM SMLLSVLGIV GLALVIWLLV KYL

Type	Start	End	Confidence
Cytoplasmic	1	206	0.94
Transmembrane Helix	207	230	0.90
Non-Cytoplasmic	231	233	0.89