YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SYP51_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSDSWMR AYNEALKLSE EINGMISERS SSAVTGPDAQ RRASAIRRKI TIFGNKLDSL  60
   61 QSLLAEIHGK PISEKEMNRR KDMVGNLRSK ANQMANALNM SNFANRDSLL GPDIKPDDSM 120
  121 SRVTGMDNQG IVGYQRQVMR EQDEGLEQLE GTVMSTKHIA LAVSEELDLQ TRLIDDLDYH 180
  181 VDVTDSRLRR VQKSLAVMNK NMRSGCSCMS MLLSVLGIVG LAVVIWMLVK YM

Type	Start	End	Confidence
Cytoplasmic	1	207	0.92
Transmembrane Helix	208	229	0.93
Non-Cytoplasmic	230	232	0.87