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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SUS2_ARATH
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFFDLVYI SWIGFLNKFL SFWVFWVCLV RYVAQGKGIL QSHQLIDEFL KTVKVDGTLE  60
   61 DLNKSPFMKV LQEAIVLPPF VALAIRPRPG VREYVRVNVY ELSVDHLTVS EYLRFKEELV 120
  121 NGHANGDYLL ELDFEPFNAT LPRPTRSSSI GNGVQFLNRH LSSIMFRNKE SMEPLLEFLR 180
  181 THKHDGRPMM LNDRIQNIPI LQGALARAEE FLSKLPLATP YSEFEFELQG MGFERGWGDT 240
  241 AQKVSEMVHL LLDILQAPDP SVLETFLGRI PMVFNVVILS PHGYFGQANV LGLPDTGGQV 300
  301 VYILDQVRAL ENEMLLRIQK QGLEVIPKIL IVTRLLPEAK GTTCNQRLER VSGTEHAHIL 360
  361 RIPFRTEKGI LRKWISRFDV WPYLETFAED ASNEISAELQ GVPNLIIGNY SDGNLVASLL 420
  421 ASKLGVIQCN IAHALEKTKY PESDIYWRNH EDKYHFSSQF TADLIAMNNA DFIITSTYQE 480
  481 IAGSKNNVGQ YESHTAFTMP GLYRVVHGID VFDPKFNIVS PGADMTIYFP YSDKERRLTA 540
  541 LHESIEELLF SAEQNDEHVG LLSDQSKPII FSMARLDRVK NLTGLVECYA KNSKLRELAN 600
  601 LVIVGGYIDE NQSRDREEMA EIQKMHSLIE QYDLHGEFRW IAAQMNRARN GELYRYIADT 660
  661 KGVFVQPAFY EAFGLTVVES MTCALPTFAT CHGGPAEIIE NGVSGFHIDP YHPDQVAATL 720
  721 VSFFETCNTN PNHWVKISEG GLKRIYERYT WKKYSERLLT LAGVYAFWKH VSKLERRETR 780
  781 RYLEMFYSLK FRDLANSIPL ATDEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle