YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SSL11_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRSFVSLIS LLLLLSFSSS VLSTKKSSFQ KLPVPGNRTG PEAFAFDSTG KGFYTGVTGG  60
   61 KILKYLPKKG YVDFAQITNS SKSSLCDGAL GTTNVEKCGR PAGIAFNTKT GDLYVADAAL 120
  121 GLHVIPRRGG LAKKIADSVG GKPFLFLDGL DVDPTTGVVY FTSFSSTFGP RDVLKAVATK 180
  181 DSTGKFFKYD PSKKVVTVLM EGLSGSAGCA VSSDGSFVLV GQFTKSNIKR YWIKGSKAGT 240
  241 SEDFTNSVSN PDNIKRIGST GNFWVASVVN SATGPTNPSA VKVSSAGKVL QTIPLKDKFG 300
  301 DTLVSEVNEY KGQLYIGALF GPFAGILKL

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	329	0.99