YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SUT31_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	85	0.94
Transmembrane Helix	86	103	0.81
Non-Cytoplasmic	104	122	0.60
Transmembrane Helix	123	150	0.71
Cytoplasmic	151	161	0.66
Transmembrane Helix	162	184	0.88
Non-Cytoplasmic	185	191	0.53
Transmembrane Helix	192	211	0.82
Cytoplasmic	212	270	0.38
Transmembrane Helix	271	294	0.90
Non-Cytoplasmic	295	327	0.56
Transmembrane Helix	328	352	0.78
Cytoplasmic	353	363	0.57
Transmembrane Helix	364	386	0.85
Non-Cytoplasmic	387	398	0.46
Transmembrane Helix	399	418	0.89
Cytoplasmic	419	425	0.38
Transmembrane Helix	426	447	0.87
Non-Cytoplasmic	448	462	0.50
Transmembrane Helix	463	490	0.80
Cytoplasmic	491	658	0.58

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTEDYTFPQ GAEELHRRHH TVEAPQPQPF LKSLQYSVKE TLFPDDPFRQ FKNQNASRKF  60
   61 VLGLKYFLPI FEWAPRYNLK FFKSDLIAGI TIASLAIPQG ISYAKLANLP PILGLYSSFV 120
  121 PPLVYAVLGS SRDLAVGTVA VASLLTGAML SKEVDAEKDP KLYLHLAFTA TFFAGVLEAS 180
  181 LGIFRLGFIV DFLSHATIVG FMGGAATVVS LQQLKGIFGL KHFTDSTDVI SVMRSVFSQT 240
  241 HEWRWESGVL GCGFLFFLLS TRYFSIKKPK FFWVAAMAPL TSVILGSLLV YFTHAERHGV 300
  301 QVIGDLKKGL NPLSGSDLIF TSPYMSTAVK TGLITGIIAL AEGVAVGRSF AMFKNYNIDG 360
  361 NKEMIAFGMM NIVGSFTSCY LTTGPFSRSA VNYNAGCKTA MSNIVMAIAV MFTLLFLTPL 420
  421 FHYTPLVVLS AIIISAMLGL IDYQAAIHLW KVDKFDFLVC MSAYVGVVFG SVEIGLVVAV 480
  481 AISIARLLLF VSRPKTAVKG NIPNSMIYRN TEQYPSSRTV PGILILEIDA PIYFANASYL 540
  541 RERIIRWIDE EEERVKQSGE SSLQYIILDM SAVGNIDTSG ISMMVEIKKV IDRRALKLVL 600
  601 SNPKGEVVKK LTRSKFIGDH LGKEWMFLTV GEAVEACSYM LHTFKTEPAS KNEPWNNV