YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SGPL_ARATH
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSFSYSSMK SMLIQARGSL NSRLSEFEPL VLLLVPLVSL FLAQIIGSVF GVVHEKGLKA  60
   61 CLIGFIMGLL KMIPGVQNYI DAEKQKVVDQ LQSGSSSKKK NKTEVLPVKG LGVEVLEKME 120
  121 NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV 180
  181 AMTAALLGSK ETASGGQICG NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS 240
  241 AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ 300
  301 LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV 360
  361 LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA WAAMMSLGEE GYLQNTSKIM 420
  421 EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH 480
  481 ICITLQHVPV VDDFLRDLRE AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM 540
  541 DSQY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle