YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RPS2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFISSLIVG CAQVLCESMN MAERRGHKTD LRQAITDLET AIGDLKAIRD DLTLRIQQDG  60
   61 LEGRSCSNRA REWLSAVQVT ETKTALLLVR FRRREQRTRM RRRYLSCFGC ADYKLCKKVS 120
  121 AILKSIGELR ERSEAIKTDG GSIQVTCREI PIKSVVGNTT MMEQVLEFLS EEEERGIIGV 180
  181 YGPGGVGKTT LMQSINNELI TKGHQYDVLI WVQMSREFGE CTIQQAVGAR LGLSWDEKET 240
  241 GENRALKIYR ALRQKRFLLL LDDVWEEIDL EKTGVPRPDR ENKCKVMFTT RSIALCNNMG 300
  301 AEYKLRVEFL EKKHAWELFC SKVWRKDLLE SSSIRRLAEI IVSKCGGLPL ALITLGGAMA 360
  361 HRETEEEWIH ASEVLTRFPA EMKGMNYVFA LLKFSYDNLE SDLLRSCFLY CALFPEEHSI 420
  421 EIEQLVEYWV GEGFLTSSHG VNTIYKGYFL IGDLKAACLL ETGDEKTQVK MHNVVRSFAL 480
  481 WMASEQGTYK ELILVEPSMG HTEAPKAENW RQALVISLLD NRIQTLPEKL ICPKLTTLML 540
  541 QQNSSLKKIP TGFFMHMPVL RVLDLSFTSI TEIPLSIKYL VELYHLSMSG TKISVLPQEL 600
  601 GNLRKLKHLD LQRTQFLQTI PRDAICWLSK LEVLNLYYSY AGWELQSFGE DEAEELGFAD 660
  661 LEYLENLTTL GITVLSLETL KTLFEFGALH KHIQHLHVEE CNELLYFNLP SLTNHGRNLR 720
  721 RLSIKSCHDL EYLVTPADFE NDWLPSLEVL TLHSLHNLTR VWGNSVSQDC LRNIRCINIS 780
  781 HCNKLKNVSW VQKLPKLEVI ELFDCREIEE LISEHESPSV EDPTLFPSLK TLRTRDLPEL 840
  841 NSILPSRFSF QKVETLVITN CPRVKKLPFQ ERRTQMNLPT VYCEEKWWKA LEKDQPNEEL 900
  901 CYLPRFVPN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle