YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CP31A_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSIVTSSL KPLAMADSSS STIFSHPSIS STISSSRIRS SSVSLLTGRI NLPLSFSRVS  60
   61 LSLKTKTHLK KSPFVSFVAQ TSDWAEEGGE GSVAVEETEN SLESQDVSEG DESEGDASEG 120
  121 DVSEGDESEG DVSEGAVSER AEFPEPSEEA KLFVGNLAYD VNSQALAMLF EQAGTVEIAE 180
  181 VIYNRETDQS RGFGFVTMSS VDEAETAVEK FNRYDLNGRL LTVNKAAPRG SRPERAPRVY 240
  241 EPAFRVYVGN LPWDVDNGRL EQLFSEHGKV VEARVVYDRE TGRSRGFGFV TMSDVDELNE 300
  301 AISALDGQNL EGRAIRVNVA EERPPRRGY

Type	Start	End	Confidence
Signal Peptide	1	16	0.59
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	329	0.99