YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK27_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMATSMSLN LIGAFKGLSL SSTSSFLRGD LSFSPKTSFT VTLPLENLQA PIPLTIESAH  60
   61 KKGAGSTKNG RDSPGQRLGV KIYGDQVAKP GAIIVRQRGT KFHAGKNVGI GKDHTIFSLI 120
  121 DGLVKFEKFG PDRKKISVYP REIVPENPNS YRARKRENFR LQREKKKARR ENYSYTLPTP 180
  181 ELVLASASVD DAEANPEC

Type	Start	End	Confidence
Signal Peptide	1	25	0.55
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	198	0.98