YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK24_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATMSALQSS FTSLSLSPSS SFLGQRLISP ISLSVTSPVK PAENPCLVLA KLKRWERKEC  60
   61 KPNSLPILHK MHVKFGDTVK VISGRDKGKI GEVTKIFTHN STIVIKDVNL KTKHMKSREE 120
  121 GEPGQIVKIE APIHSSNVML YSKEKDVVSR VGHKVLEDGQ KVRYLIKTGE LIDTIEKWKL 180
  181 LKEAKDKETT QVAVTSAS

Type	Start	End	Confidence
Signal Peptide	1	24	0.92
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	198	0.99