YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK11_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLSTLC SSTSSSLHPN SKLSHSLSAK LSSKANVSVQ FLGKKQSPLL SSTPRFLTVI  60
   61 AMAPPKPGGK AKKVVGVIKL ALEAGKATPA PPVGPALGSK GVNIMAFCKD YNARTADKAG 120
  121 YIIPVEITVF DDKSFTFILK TPPASVLLLK AAGVEKGSKD PQQDKVGVIT IDQLRTIAAE 180
  181 KLPDLNCTTI ESAMRIIAGT AANMGIDIDP PILEPKKKAV LL

Type	Start	End	Confidence
Signal Peptide	1	19	0.89
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	222	0.99