YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RC22_ARATH
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSCELCCE IFIAILLPPV GVCLRHGCCT VEFFICLILT CLGYLPGIIY AIYAICFLHR  60
   61 DEYFDEYRRP IYYVA

Type	Start	End	Confidence
Cytoplasmic	1	7	0.76
Transmembrane Helix	8	28	0.48
Non-Cytoplasmic	29	32	0.46
Transmembrane Helix	33	58	0.80
Cytoplasmic	59	75	0.50