YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK122_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTLSIAT TIRSSSFSSG LASAHHFPSR PLSIEFPFSF GVSSSSTLSH RAIYLHPISA  60
   61 VKTPKKIKKI GSEISSLTLE ESRILVDYVQ DKFGVSILFS APAAAALPPP LDNGGATASV 120
  121 ERQTTFDVVI NDVPRGNRIA VITAIRAMTS LSLSESKELI EGFPKKFKEG VTKDEAEEDK 180
  181 TQLEEAGAKV SIV

Type	Start	End	Confidence
Signal Peptide	1	22	0.87
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	193	0.99