YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSAH2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFATIAAV QPSAAVKGLG GSSLAGAKLF IKPSRQSFKT KSTRAGAVVA KYGDKSVYFD  60
   61 LEDLGNTTGQ WDVYGSDAPS PYNPLQSKFF ETFAAPFTKR GLLLKFLILG GGSLLTYVSA 120
  121 NSTGDVLPIK RGPQEPPKLG PRGKL

Type	Start	End	Confidence
Signal Peptide	1	15	0.61
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	145	0.75