YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSAD2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQAAGIFS PAITTTTSAV KKLHLFSSSH RPKSLSFTKT AIRAEKTESS SAAPAVKEAP  60
   61 VGFTPPQLDP NTPSPIFAGS TGGLLRKAQV EEFYVITWNS PKEQIFEMPT GGAAIMREGP 120
  121 NLLKLARKEQ CLALGTRLRS KYKITYQFYR VFPNGEVQYL HPKDGVYPEK ANPGREGVGL 180
  181 NMRSIGKNVS PIEVKFTGKQ SYDL

Type	Start	End	Confidence
Signal Peptide	1	19	0.75
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	204	0.99