YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSAK_ARATH
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTMMTTLP QFNGLRATKI SAAPVQGLAS VQPMRRKGNG ALGAKCDFIG SSTNLIMVTS  60
   61 TTLMLFAGRF GLAPSANRKA TAGLRLEARD SGLQTGDPAG FTLADTLACG TVGHIIGVGV 120
  121 VLGLKNIGAI

Type	Start	End	Confidence
Cytoplasmic	1	45	0.84
Transmembrane Helix	46	67	0.80
Non-Cytoplasmic	68	102	0.87
Transmembrane Helix	103	124	0.84
Cytoplasmic	125	130	0.71