YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PR5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANISSIHIL FLVFITSGIA VMATDFTLRN NCPTTVWAGT LAGQGPKLGD GGFELTPGAS  60
   61 RQLTAPAGWS GRFWARTGCN FDASGNGRCV TGDCGGLRCN GGGVPPVTLA EFTLVGDGGK 120
  121 DFYDVSLVDG YNVKLGIRPS GGSGDCKYAG CVSDLNAACP DMLKVMDQNN VVACKSACER 180
  181 FNTDQYCCRG ANDKPETCPP TDYSRIFKNA CPDAYSYAYD DETSTFTCTG ANYEITFCP

Type	Start	End	Confidence
Signal Peptide	1	23	0.87
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	239	0.97