YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PLAS1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAITSATVT IPSFTGLKLA VSSKPKTLST ISRSTSATRA PPKLALKSSL KDFGVIAVAT  60
   61 AASIVLAGNA MAMEVLLGSD DGSLAFVPSE FTVAKGEKIV FKNNAGFPHN VVFDEDEIPS 120
  121 GVDASKISMD ETALLNGAGE TYEVTLTEPG SYGFYCAPHQ GAGMVGKLTV K

Type	Start	End	Confidence
Signal Peptide	1	72	0.43
N-region	1	63
H-region	64	69
C-region	70	72
Cleavage Site	72	73
Non-Cytoplasmic	73	171	0.97