YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PLY22_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRPNSLLIP SNLSTTKSQR NTMLNSSYLS FALIFFCCIL FSALASSLPV SDPELVVEEV  60
   61 HRKINESISR RKLGFFSCGS GNPIDDCWRC DKDWEKNRKR LADCGIGFGK NAIGGRDGEI 120
  121 YVVTDPGNDD PVNPRPGTLR YAVIQDEPLW IIFKRDMTIQ LKEELIMNSF KTLDGRGASV 180
  181 HISGGPCITI QYVTNIIIHG LHIHDCKQGG NTYVRDSPEH YGYRTVSDGD GVSIFGGSHV 240
  241 WVDHCSLSNC NDGLIDAIRG STAITISNNY LTHHNKVMLL GHSDTYEQDK NMQVTIAFNH 300
  301 FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSANPTI NSQGNRFLAP DDSSSKEVTK 360
  361 HEDAPEDEWR NWNWRSEGDL LLNGAFFTYS GAGPAKSSSY SKASSLAARP SSHVGEITIA 420
  421 SGALSCKRGS HC

Type	Start	End	Confidence
Signal Peptide	1	45	0.90
N-region	1	36
H-region	37	42
C-region	43	45
Cleavage Site	45	46
Non-Cytoplasmic	46	432	0.99