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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PHO1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKFSKELEA QLIPEWKEAF VNYCLLKKQI KKIKTSRKPK PASHYPIGHH SDFGRSLFDP  60
   61 VRKLARTFSD KLFSNSEKPE ILQVRRRRGS SETGDDVDEI YQTELVQLFS EEDEVKVFFA 120
  121 RLDEELNKVN QFHKPKETEF LERGEILKKQ LETLAELKQI LSDRKKRNLS GSNSHRSFSS 180
  181 SVRNSDFSAG SPGELSEIQS ETSRTDEIIE ALERNGVSFI NSATRSKTKG GKPKMSLRVD 240
  241 IPDAVAGAEG GIARSIATAM SVLWEELVNN PRSDFTNWKN IQSAEKKIRS AFVELYRGLG 300
  301 LLKTYSSLNM IAFTKIMKKF DKVAGQNASS TYLKVVKRSQ FISSDKVVRL MDEVESIFTK 360
  361 HFANNDRKKA MKFLKPHQTK DSHMVTFFVG LFTGCFISLF VIYIILAHLS GIFTSSDQVS 420
  421 YLETVYPVFS VFALLSLHMF MYGCNLYMWK NTRINYTFIF EFAPNTALRY RDAFLMGTTF 480
  481 MTSVVAAMVI HLILRASGFS ASQVDTIPGI LLLIFICVLI CPFNTFYRPT RFCFIRILRK 540
  541 IVCSPFYKVL MVDFFMGDQL TSQIPLLRHL ETTGCYFLAQ SFKTHEYNTC KNGRYYREFA 600
  601 YLISFLPYFW RAMQCVRRWW DESNPDHLIN MGKYVSAMVA AGVRITYARE NNDLWLTMVL 660
  661 VSSVVATIYQ LYWDFVKDWG LLNPKSKNPW LRDNLVLRNK NFYYLSIALN LVLRVAWIET 720
  721 IMRFRVSPVQ SHLLDFFLAS LEVIRRGHWN FYRVENEHLN NVGQFRAVKT VPLPFLDRDS 780
  781 DG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle