YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PER65_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNMQFSRGF NPFVILFCLA VVAPIISADV AILRTDYYQK TCPDFHKIVR EAVTTKQVQQ  60
   61 PTTAAGTLRL FFHDCFLEGC DASVLIATNS FNKAERDDDL NDSLPGDAFD IVTRIKTALE 120
  121 LSCPGVVSCA DILAQATRDL VTMVGGPYFD VKLGRKDGFE SKAHKVRGNV PMANQTVPDI 180
  181 HGIFKKNGFS LREMVALSGA HTIGFSHCKE FSDRLYGSRA DKEINPRFAA ALKDLCKNHT 240
  241 VDDTIAAFND VMTPGKFDNM YFKNLKRGLG LLASDHILIK DNSTKPFVDL YATNETAFFE 300
  301 DFARAMEKLG TVGVKGDKDG EVRRRCDHFN NLNV

Type	Start	End	Confidence
Signal Peptide	1	28	0.95
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	334	0.99