YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PER27_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASKRLVVS CLFLVLLFAQ ANSQGLKVGF YSKTCPQLEG IVKKVVFDAM NKAPTLGAPL  60
   61 LRMFFHDCFV RGCDGSVLLD KPNNQGEKSA VPNLSLRGFG IIDDSKAALE KVCPGIVSCS 120
  121 DILALVARDA MVALEGPSWE VETGRRDGRV SNINEVNLPS PFDNITKLIS DFRSKGLNEK 180
  181 DLVILSGGHT IGMGHCPLLT NRLYNFTGKG DSDPSLDSEY AAKLRKKCKP TDTTTALEMD 240
  241 PGSFKTFDLS YFTLVAKRRG LFQSDAALLD NSKTRAYVLQ QIRTHGSMFF NDFGVSMVKM 300
  301 GRTGVLTGKA GEIRKTCRSA N

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	321	0.99