YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PER15_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARIGSFLII LYLIYALTLC ICDDDESNYG GDKGNLFPGF YRSSCPRAEE IVRSVVAKAV  60
   61 ARETRMAASL MRLHFHDCFV QGCDGSLLLD TSGSIVTEKN SNPNSRSARG FEVVDEIKAA 120
  121 LENECPNTVS CADALTLAAR DSSVLTGGPS WMVPLGRRDS TSASLSGSNN NIPAPNNTFN 180
  181 TIVTRFNNQG LDLTDVVALS GSHTIGFSRC TSFRQRLYNQ SGNGSPDRTL EQSYAANLRQ 240
  241 RCPRSGGDQN LSELDINSAG RFDNSYFKNL IENMGLLNSD EVLFSSNEQS RELVKKYAED 300
  301 QEEFFEQFAE SMIKMGNISP LTGSSGEIRK NCRKINNS

Type	Start	End	Confidence
Signal Peptide	1	22	0.92
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	338	0.99