YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PER14_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARIGSFLIL LSLTYALTLC ICDNASNFGG NKRNLFPDFY RSSCPRAEEI VRSVVAKAFE  60
   61 RETRMAASLM RLHFHDCFVQ GCDGSLLLDT SGSIVTEKNS NPNSRSARGF EVVDEIKAAL 120
  121 ENECPNTVSC ADALTLAARD SSVLTGGPSW TVPLGRRDSA TASRAKPNKD LPEPDNLFDT 180
  181 IFLRFSNEGL NLTDLVALSG SHTIGFSRCT SFRQRLYNQS GSGSPDTTLE KSYAAILRQR 240
  241 CPRSGGDQNL SELDINSAGR FDNSYFKNLI ENMGLLNSDQ VLFSSNEQSR ELVKKYAEDQ 300
  301 EEFFEQFAES MIKMGKISPL TGSSGEIRKK CRKINNS

Type	Start	End	Confidence
Signal Peptide	1	22	0.93
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	337	0.99