YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PER11_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRLLFVFFM VHTIFIPCFS FDTPGKDLPL TLDYYKSTCP TVFDVIKKEM ECIVKEDPRN  60
   61 AAIIIRLHFH DCFVQGCDGS VLLDETETLQ GEKKASPNIN SLKGYKIVDR IKNIIESECP 120
  121 GVVSCADLLT IGARDATILV GGPYWDVPVG RKDSKTASYE LATTNLPTPE EGLISIIAKF 180
  181 YSQGLSVEDM VALIGAHTIG KAQCRNFRSR IYGDFQVTSA LNPVSETYLA SLREICPASS 240
  241 GEGDSNVTAI DNVTPNLFDN SIYHTLLRGE GLLNSDQEMY TSLFGIQTRR IVSKYAEDPV 300
  301 AFFEQFSKSM VKMGNILNSE SLADGEVRRN CRFVNT

Type	Start	End	Confidence
Signal Peptide	1	20	0.95
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	336	0.99