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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PER10_ARATH
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHKMSMYLF VSYLAIFTLF FKGFVSSFPS GYNNGYNNGH GHGLTSNLNY RFYDRSCPRL  60
   61 QTIVKSGVWR AFKDDSRIAA SLLRLHFHDC FVNGCDGSIL LNDSEDFKGE KNAQPNRNSV 120
  121 RGFEVIEDIK SDIESSCPLT VSCADIVALA AREAVVLTGG PFWPVPLGRR DSLTASEQAA 180
  181 NTNLPSPFEA LENITAKFVT LGLDLKDVVV LSGAHTIGFA QCFVIKHRLF NFKGSGQPDP 240
  241 NLAASSALLS KLKDTCPNVD SSDSKLAALD AASSVKFDNA YYVNLMNNIG LLDSDQTLMT 300
  301 DPTAAALVKS YSENPYLFSR DFAVSMVKMG NIGVMTGSDG VIRGKCGFPG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle