YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OLEO4_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVDRDRRV HVDRTDKRVH QPNYEDDVGF GGYGGYGAGS DYKSRGPSTN QILALIAGVP  60
   61 IGGTLLTLAG LTLAGSVIGL LVSIPLFLLF SPVIVPAALT IGLAVTGILA SGLFGLTGLS 120
  121 SVSWVLNYLR GTSDTVPEQL DYAKRRMADA VGYAGMKGKE MGQYVQDKAH EARETEFMTE 180
  181 THEPGKARRG S

Type	Start	End	Confidence
Cytoplasmic	1	51	0.91
Transmembrane Helix	52	86	0.73
Non-Cytoplasmic	87	93	0.55
Transmembrane Helix	94	120	0.80
Cytoplasmic	121	191	0.81