YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OLEO3_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQTRTHHE MISRDSTQEA HPKARQMVKA ATAVTAGGSL LVLSGLTLAG TVIALTVATP  60
   61 LLVIFSPVLV PAVVTVALII TGFLASGGFG IAAITAFSWL YRHMTGSGSD KIENARMKVG 120
  121 SRVQDTKYGQ HNIGVQHQQV S

Type	Start	End	Confidence
Cytoplasmic	1	32	0.95
Transmembrane Helix	33	58	0.85
Non-Cytoplasmic	59	72	0.66
Transmembrane Helix	73	99	0.86
Cytoplasmic	100	141	0.95