YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OLEO1_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTARGTHH DIIGRDQYPM MGRDRDQYQM SGRGSDYSKS RQIAKAATAV TAGGSLLVLS  60
   61 SLTLVGTVIA LTVATPLLVI FSPILVPALI TVALLITGFL SSGGFGIAAI TVFSWIYKYA 120
  121 TGEHPQGSDK LDSARMKLGS KAQDLKDRAQ YYGQQHTGGE HDRDRTRGGQ HTT

Type	Start	End	Confidence
Cytoplasmic	1	48	0.96
Transmembrane Helix	49	74	0.83
Non-Cytoplasmic	75	87	0.58
Transmembrane Helix	88	113	0.84
Cytoplasmic	114	173	0.91