YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TO204_ARATH
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMQNENERL MVFEHARKVA EATYVKNPLD AENLTRWAGA LLELSQFQTE PKQMILEAIL  60
   61 KLGEALVIDP KKHDALWLIG NAHLSFGFLS SDQTEASDNF EKASQFFQLA VEEQPESELY 120
  121 RKSLTLASKA PELHTGGTAG PSSNSAKTMK QKKTSEFKYD VFGWVILASY VVAWISFANS 180
  181 QTPVSRQ

Type	Start	End	Confidence
Cytoplasmic	1	158	0.89
Transmembrane Helix	159	178	0.88
Non-Cytoplasmic	179	187	0.91