YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TO203_ARATH
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTETEFDRI LLFEQIRQDA ENTYKSNPLD ADNLTRWGGV LLELSQFHSI SDAKQMIQEA  60
   61 ITKFEEALLI DPKKDEAVWC IGNAYTSFAF LTPDETEAKH NFDLATQFFQ QAVDEQPDNT 120
  121 HYLKSLEMTA KAPQLHAEAY KQGLGSQPMG RVEAPAPPSS KAVKNKKSSD AKYDAMGWVI 180
  181 LAIGVVAWIS FAKANVPVSP PR

Type	Start	End	Confidence
Cytoplasmic	1	174	0.88
Transmembrane Helix	175	192	0.90
Non-Cytoplasmic	193	202	0.80