YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TO201_ARATH
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLNFFEEI RKDAEETYKL NPEDADNLMR WGEALLELSQ FQNVIDSLKM IQDAISKLED  60
   61 AILIDPMKHD AVWCLGNAYT SYARLTPDDT QARLNFGLAY LFFGIAVAQQ PDNQVYHKSL 120
  121 EMADKAPQLH TGFHKNRLLS LLGGVETLAI PSPKVVKNKK SSDEKYIVMG WVILAIGVVA 180
  181 CISFRKLR

Type	Start	End	Confidence
Cytoplasmic	1	165	0.53
Transmembrane Helix	166	187	0.84
Non-Cytoplasmic	188	188	0.50