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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NRAM3_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQLENNEPL LINEEEEEET AYDETEKVHI VRNEEEDDLE HGVGCGGAPP FSWKKLWLFT  60
   61 GPGFLMSIAF LDPGNLEGDL QAGAVAGYSL LWLLMWATAM GLLVQLLSAR LGVATGRHLA 120
  121 ELCRDEYPTW ARMVLWVMAE LALIGSDIQE VIGSAIAIKI LSNGILPLWA GVVITALDCF 180
  181 VFLFLENYGI RKLEAVFAVL IATMGVSFAW MFGQAKPSGS ELLIGILVPK LSSRTIQKAV 240
  241 GVVGCIIMPH NVFLHSALVQ SREVDKRQKY RVQEALNYYT IESTIALFIS FLINLFVTTV 300
  301 FAKGFYNTDL ANSIGLVNAG QYLQEKYGGG VFPILYIWAI GLLAAGQSST ITGTYAGQFI 360
  361 MGGFLNFKMK KWLRALITRS CAIIPTIIVA LVFDSSEATL DVLNEWLNVL QSIQIPFALI 420
  421 PLLCLVSKEQ IMGSFKIGPL YKTIAWLVAA LVIMINGYLL LEFFSNEVSG IVYTGFVTLF 480
  481 TASYGAFILY LIARGITFTP WPFKAESSH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle