YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MPPA1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL  60
   61 QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS IGLYVDCGSI YEAPYFHGAT 120
  121 HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS 180
  181 VRNPAFLDWE VNEELRKMKV EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL 240
  241 NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR 300
  301 QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN 360
  361 EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA KELKDVAGGK VNQAHLDRAK 420
  421 AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP 480
  481 LTMGSFGDVL AVPSYDTISS KFR

Type	Start	End	Confidence
Signal Peptide	1	37	0.56
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	503	0.98