YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MLO3_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDKEESNHS SEVGAVRSLQ ETPTWALATV CFFFIAVSIC LERLINLLST RLKKNRKTSL  60
   61 LEAVEKLKSV LMVLGFMSLM LNVTEGEVSK ICIPIKYANR MLPCRKTIKS HNDVSEDDDD 120
  121 DDGDNHDNSF FHQCSSKGKT SLISEEGLTQ LSYFFFVLAC MHILCNLAIL LLGMAKMRKW 180
  181 NSWEKETQTV EYLAANDPNR FRITRDTTFA RRHLSSWTET SFQLWIKCFF RQFYNSVAKV 240
  241 DYLTLRHGFI FAHVSSNNAF NFQNYIQRSL HEDFKTVVGI SPLMWLTVVI FMLLDVSGWR 300
  301 VYFYMSFVPL IIVLVIGTKL EMIVAKMAVT IKENNSVIRG TPLVESNDTH FWFSNPRFLL 360
  361 SILHYTLFLN TFEMAFIVWI TWQFGINSCY HDNQGIIITR LVLAVTVQFL SSYITLPLYA 420
  421 IVTQMGSSYK RAILEEQLAN VLRHWQGMVR DKKKTIQTPD TDNNSNNNNG DIDSGESPVQ 480
  481 TEVASEFRFS GRQSPILQEI QIQEKTER

Type	Start	End	Confidence
Non-Cytoplasmic	1	23	0.90
Transmembrane Helix	24	46	0.90
Cytoplasmic	47	66	0.81
Transmembrane Helix	67	84	0.82
Non-Cytoplasmic	85	151	0.96
Transmembrane Helix	152	173	0.94
Cytoplasmic	174	275	0.96
Transmembrane Helix	276	294	0.96
Non-Cytoplasmic	295	300	0.78
Transmembrane Helix	301	323	0.84
Cytoplasmic	324	361	0.93
Transmembrane Helix	362	382	0.92
Non-Cytoplasmic	383	396	0.87
Transmembrane Helix	397	422	0.83
Cytoplasmic	423	508	0.96