YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MLO15_ARATH
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGTTLEY TPTWVVALVC SVIVSISFAV ERLIHRAGKH FKNNDQKQLF GALQKIKEEL  60
   61 MLVGFISLLL SVGQSKIAKI CISKELSEKF LPCTKPAGAE KSLKDSSHFQ FSFTGRHLLA 120
  121 GDAPAGDYCS LKGKVPIMSL SALHELHIFI FVLAVAHIIF CLLTIVFGTM KIKQWKKWED 180
  181 KVLEKDFDTD QSIKKFTHVQ EHEFIRSRFL GVGKADASLG WVQSFMKQFL ASVNESDYIT 240
  241 MRLGFVTTHC KTNPKFNFHK YLMRALNSDF KKVVGISWYL WVFVVLFLLL NIVAWHVYFW 300
  301 LAFIPLILLL AVGTKLEHII TDLAHEVAEK HIAVEGDLVV RPSDDLFWFQ SPRLVLFLIH 360
  361 FILFQNSFEI AYFFFILFQF GWDSCIMDHV KFVIPRLVIG VIIQLLCSYS TLPLYALVTQ 420
  421 MGSSFKGAIF NEQTQEHLVG WAKMAKRGVK KGATQVGTSH DATSPRPSIQ LNSLLGKGSS 480
  481 QQNQNPKEKS EIAHHD

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.70
Transmembrane Helix	12	34	0.80
Cytoplasmic	35	59	0.69
Transmembrane Helix	60	78	0.62
Non-Cytoplasmic	79	145	0.92
Transmembrane Helix	146	168	0.94
Cytoplasmic	169	273	0.96
Transmembrane Helix	274	299	0.82
Non-Cytoplasmic	300	355	0.50
Transmembrane Helix	356	378	0.90
Cytoplasmic	379	391	0.45
Transmembrane Helix	392	417	0.81
Non-Cytoplasmic	418	496	0.50