YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MLO14_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREETEPSER TLGLTPTWSV ATVLTIFVFV SLIVERSIHR LSNWLQKTKR KPLFAALEKM  60
   61 KEELMLLGFI SLLLTATSST IANICVSSSF HNDRFVPCTP SEINEELEST ISTVKRTQLT 120
  121 RSLFLHTLRR RLSGIGEDTC SEGHEPFLSY EGMEQLHRFI FIMAVTHVTY SCLTMLLAIV 180
  181 KIHRWRIWED EVHMDRNDCL TVVAREKIFR RQTTFVQYHT SAPLVKNRLL IWVICFFRQF 240
  241 GHSVVRSDYL TLRKGFIMNH HLTLTYDFHS YMIRSMEEEF QKIVGVSGPL WGFVVGFMLF 300
  301 NIKGSNLYFW LAIIPITLVL LVGAKLQHVI ATLALENASI TEYASGIKLR PRDELFWFKK 360
  361 PELLLSLIHF IQFQNAFELA SFFWFWWQFG YNSCFLRNHL LVYLRLILGF SGQFLCSYST 420
  421 LPLYALVTQM GTNYKAALLP QRVRETINGW GKATRRKRRH GLYGDDSTIR TETSTIASVD 480
  481 EYNDQVLDVS ETSPVQDNEL ELQLIRGACG NSSSVETPIL RPCASISSTT FSRLQTETTD 540
  541 SLSRSSSLPM RREC

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.84
Transmembrane Helix	17	34	0.91
Cytoplasmic	35	63	0.85
Transmembrane Helix	64	86	0.88
Non-Cytoplasmic	87	158	0.94
Transmembrane Helix	159	179	0.95
Cytoplasmic	180	279	0.95
Transmembrane Helix	280	300	0.89
Non-Cytoplasmic	301	306	0.75
Transmembrane Helix	307	329	0.85
Cytoplasmic	330	364	0.88
Transmembrane Helix	365	387	0.84
Non-Cytoplasmic	388	402	0.79
Transmembrane Helix	403	427	0.74
Cytoplasmic	428	554	0.85