YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MEM11_ARATH
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGIVEGGG SLSDVYSSAK RILLKARDGI ERLERFESSS MDSPDLASSV KRDITEVRSL  60
   61 CSNMDTLWRS IPVKSQRDLW RRKTEQVGEE AEYLNLSLEK YMSRNQRKML EAKERADLLG 120
  121 RASGEGAHIL QIFDEEAQAM SSVKNSKRML EESFSSGVAI LSKYAEQRDR LKSAQRKALD 180
  181 VLNTVGLSNS VLRLIERRNR VDTWIKYAGM IATLVILYLF IRWTR

Type	Start	End	Confidence
Cytoplasmic	1	202	0.75
Transmembrane Helix	203	222	0.94
Non-Cytoplasmic	223	225	0.62